Research workbench
AlphaFold monomer V2.0 prediction for inactive serine protease PAMR1 (Q8BU25)
Analyse AlphaFold monomer V2.0 prediction for inactive serine protease PAMR1 (Q8BU25) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8BU25
- Type
- protein
- Length
- 720 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Bc3a9DEF23A29F3dcbA8193981eA4F9A600a340
- Molecule
- Inactive serine protease PAMR1
- UniProt
- Q8BU25
- Pockets
- 7 · best druggability 0.54
Structure
1 distinct chain · 7% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Inactive serine protease PAMR1 | protein | 720 | 7% helix, 37% strand | Q8BU25 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 230 | 0.54 | 0.77 | 30 | empty |
| 2 | 130 | 0.47 | 0.78 | 24 | empty |
| 3 | 144 | 0.46 | 0.76 | 22 | empty |
| 4 | 185 | 0.46 | 0.74 | 25 | empty |
| 5 | 82 | 0.39 | 0.77 | 17 | empty |
Modifications
Observed in the structure: 18 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BU25
- Elsewhere: UniProt Q8BU25 · AlphaFold DB Q8BU25
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