Research workbench
AlphaFold monomer V2.0 prediction for pup--protein ligase (C0ZZU4)
Analyse AlphaFold monomer V2.0 prediction for pup--protein ligase (C0ZZU4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C0ZZU4
- Type
- protein
- Length
- 452 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x878270033Ee620a8cF73fb621f575785954ef24B
- Molecule
- Pup--protein ligase
- UniProt
- C0ZZU4
- Pockets
- 5 · best druggability 0.69
Structure
1 distinct chain · 42% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pup--protein ligase | protein | 452 | 42% helix, 19% strand | C0ZZU4 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 235 | 0.69 | 0.86 | 42 | empty |
| 2 | 92 | 0.60 | 0.87 | 17 | empty |
| 3 | 170 | 0.51 | 0.78 | 28 | empty |
| 4 | 212 | 0.49 | 0.75 | 37 | empty |
| 5 | 65 | 0.33 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C0ZZU4
- Elsewhere: UniProt C0ZZU4 · AlphaFold DB C0ZZU4
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