Research workbench
AlphaFold monomer V2.0 prediction for pup--protein ligase (A5U4C3)
Analyse AlphaFold monomer V2.0 prediction for pup--protein ligase (A5U4C3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5U4C3
- Type
- protein
- Length
- 452 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- Pup--protein ligase
- UniProt
- A5U4C3
- Pockets
- 6 · best druggability 0.67
Structure
1 distinct chain · 42% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pup--protein ligase | protein | 452 | 42% helix, 19% strand | A5U4C3 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 229 | 0.67 | 0.85 | 44 | empty |
| 2 | 63 | 0.51 | 0.86 | 17 | empty |
| 3 | 168 | 0.48 | 0.76 | 26 | empty |
| 4 | 103 | 0.40 | 0.77 | 17 | empty |
| 5 | 120 | 0.38 | 0.74 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5U4C3
- Elsewhere: UniProt A5U4C3 · AlphaFold DB A5U4C3
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