Research workbench
AlphaFold monomer V2.0 prediction for pup--protein ligase (C3PGA3)
Analyse AlphaFold monomer V2.0 prediction for pup--protein ligase (C3PGA3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C3PGA3
- Type
- protein
- Length
- 475 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- Pup--protein ligase
- UniProt
- C3PGA3
- Pockets
- 7 · best druggability 0.68
Structure
1 distinct chain · 41% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pup--protein ligase | protein | 475 | 41% helix, 16% strand | C3PGA3 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 270 | 0.68 | 0.84 | 42 | empty |
| 2 | 119 | 0.51 | 0.81 | 18 | empty |
| 3 | 143 | 0.47 | 0.77 | 19 | empty |
| 4 | 151 | 0.46 | 0.76 | 15 | empty |
| 5 | 160 | 0.46 | 0.76 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C3PGA3
- Elsewhere: UniProt C3PGA3 · AlphaFold DB C3PGA3
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