Research workbench
AlphaFold monomer V2.0 prediction for pup--protein ligase (Q8G3G3)
Analyse AlphaFold monomer V2.0 prediction for pup--protein ligase (Q8G3G3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8G3G3
- Type
- protein
- Length
- 486 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
- Molecule
- Pup--protein ligase
- UniProt
- Q8G3G3
- Pockets
- 5 · best druggability 0.74
Structure
1 distinct chain · 43% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pup--protein ligase | protein | 486 | 43% helix, 16% strand | Q8G3G3 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 592 | 0.74 | 0.81 | 82 | empty |
| 2 | 199 | 0.52 | 0.77 | 21 | empty |
| 3 | 129 | 0.47 | 0.79 | 22 | empty |
| 4 | 95 | 0.47 | 0.81 | 20 | empty |
| 5 | 63 | 0.32 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8G3G3
- Elsewhere: UniProt Q8G3G3 · AlphaFold DB Q8G3G3
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