Research workbench
AlphaFold monomer V2.0 prediction for pup--protein ligase 2 (P72270)
Analyse AlphaFold monomer V2.0 prediction for pup--protein ligase 2 (P72270) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P72270
- Type
- protein
- Length
- 447 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa13B98679bfC35227A43337E7Ca558F949C4B5e4
- Molecule
- Pup--protein ligase 2
- UniProt
- P72270
- Pockets
- 6 · best druggability 0.70
Structure
1 distinct chain · 43% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pup--protein ligase 2 | protein | 447 | 43% helix, 18% strand | P72270 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 324 | 0.70 | 0.83 | 40 | empty |
| 2 | 200 | 0.52 | 0.77 | 34 | empty |
| 3 | 164 | 0.49 | 0.78 | 23 | empty |
| 4 | 127 | 0.48 | 0.80 | 24 | empty |
| 5 | 52 | 0.47 | 0.86 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P72270
- Elsewhere: UniProt P72270 · AlphaFold DB P72270
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