Research workbench
AlphaFold monomer V2.0 prediction for protein pad-1 (Q5WNI9)
Analyse AlphaFold monomer V2.0 prediction for protein pad-1 (Q5WNI9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5WNI9
- Type
- protein
- Length
- 2,340 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Protein pad-1
- UniProt
- Q5WNI9
- Pockets
- 20 · best druggability 0.78
Structure
1 distinct chain · 56% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein pad-1 | protein | 2340 | 56% helix, 2% strand | Q5WNI9 |
Pockets
20 pockets found on a 1 Å grid, 12 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1132 | 0.78 | 0.80 | 101 | empty |
| 2 | 572 | 0.72 | 0.80 | 74 | empty |
| 3 | 978 | 0.71 | 0.75 | 76 | empty |
| 4 | 321 | 0.67 | 0.81 | 24 | empty |
| 5 | 588 | 0.66 | 0.77 | 47 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5WNI9
- Elsewhere: UniProt Q5WNI9 · AlphaFold DB Q5WNI9
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