Research workbench
AlphaFold monomer V2.0 prediction for pH-response transcription factor PACC/RIM101 (Q873X0)
Analyse AlphaFold monomer V2.0 prediction for pH-response transcription factor… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q873X0
- Type
- protein
- Length
- 613 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x70cB7fb40A2dcEd575CF6998DfBC187da701eAcD
- Molecule
- PH-response transcription factor PACC/RIM101
- UniProt
- Q873X0
- Pockets
- 5 · best druggability 0.63
Structure
1 distinct chain · 21% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PH-response transcription factor PACC/RIM101 | protein | 613 | 21% helix, 3% strand | Q873X0 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 172 | 0.63 | 0.84 | 33 | empty |
| 2 | 93 | 0.49 | 0.82 | 18 | empty |
| 3 | 127 | 0.45 | 0.77 | 14 | empty |
| 4 | 81 | 0.35 | 0.76 | 13 | empty |
| 5 | 50 | 0.25 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q873X0
- Elsewhere: UniProt Q873X0 · AlphaFold DB Q873X0
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