Research workbench
AlphaFold monomer V2.0 prediction for basic phospholipase A2 homolog bothropstoxin-II (P45881)
Analyse AlphaFold monomer V2.0 prediction for basic phospholipase A2 homolog… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P45881
- Type
- protein
- Length
- 138 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- Basic phospholipase A2 homolog bothropstoxin-II
- UniProt
- P45881
- Pockets
- 1 · best druggability 0.47
Structure
1 distinct chain · 43% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Basic phospholipase A2 homolog bothropstoxin-II | protein | 138 | 43% helix, 7% strand | P45881 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 156 | 0.47 | 0.76 | 21 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Compared structures
- 3JR8 · Crystal Structure of BthTX-II (Asp49-PLA2 from Bothrops jararacussu snake venom) with… · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 3JR8 · Crystal structure of bthtx-II (ASP49-PLA2 from bothrops jararacussu snake venom) with… · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 2OQD · Crystal Structure of BthTX-II · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 2OQD · Crystal structure of bthtx-II · an experimental structure of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P45881
- Elsewhere: UniProt P45881 · AlphaFold DB P45881
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