Research workbench
AlphaFold monomer V2.0 prediction for oviduct-specific glycoprotein (Q28990)
Analyse AlphaFold monomer V2.0 prediction for oviduct-specific glycoprotein (Q28990) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q28990
- Type
- protein
- Length
- 527 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF3dC0C0AfbCaFe21EC13288d7b1F1aD875Dd78F1
- Molecule
- Oviduct-specific glycoprotein
- UniProt
- Q28990
- Pockets
- 5 · best druggability 0.79
Structure
1 distinct chain · 31% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Oviduct-specific glycoprotein | protein | 527 | 31% helix, 16% strand | Q28990 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 944 | 0.79 | 0.81 | 73 | empty |
| 2 | 114 | 0.41 | 0.75 | 20 | empty |
| 3 | 74 | 0.37 | 0.77 | 17 | empty |
| 4 | 64 | 0.30 | 0.74 | 12 | empty |
| 5 | 55 | 0.28 | 0.74 | 16 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q28990
- Elsewhere: UniProt Q28990 · AlphaFold DB Q28990
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