Research workbench
AlphaFold monomer V2.0 prediction for trehalose-6-phosphate synthase (P31677)
Analyse AlphaFold monomer V2.0 prediction for trehalose-6-phosphate synthase (P31677) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P31677
- Type
- protein
- Length
- 474 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Trehalose-6-phosphate synthase
- UniProt
- P31677
- Pockets
- 3 · best druggability 0.76
Structure
1 distinct chain · 47% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Trehalose-6-phosphate synthase | protein | 474 | 47% helix, 19% strand | P31677 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 882 | 0.76 | 0.79 | 53 | empty |
| 2 | 185 | 0.61 | 0.83 | 30 | empty |
| 3 | 200 | 0.47 | 0.75 | 28 | empty |
Compared structures
- 2WTX · Insight into the mechanism of enzymatic glycosyltransfer with retention through the… · an experimental structure of the same protein · chain A against D, TM-score 0.95
- 2WTX · Insight into the mechanism of enzymatic glycosyltransfer with retention through the… · an experimental structure of the same protein · chain A against D, TM-score 0.95
- 1UQT · Trehalose-6-phosphate from E. COLI bound with udp-2-fluoro glucose. · an experimental structure of the same protein · chain A against B, TM-score 0.94
- 1UQT · Trehalose-6-phosphate from E. coli bound with UDP-2-fluoro glucose. · an experimental structure of the same protein · chain A against B, TM-score 0.94
- 1UQU · Trehalose-6-phosphate from E. coli bound with UDP-glucose. · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1UQU · Trehalose-6-phosphate from E. COLI bound with udp-glucose. · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1GZ5 · Trehalose-6-phosphate synthase. otsa · an experimental structure of the same protein · chain A against B, TM-score 0.93
- 1GZ5 · Trehalose-6-phosphate synthase. OtsA · an experimental structure of the same protein · chain A against B, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31677
- Elsewhere: UniProt P31677 · AlphaFold DB P31677
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