Research workbench
AlphaFold monomer V2.0 prediction for protein kinase ospg (Q3YTH2)
Analyse AlphaFold monomer V2.0 prediction for protein kinase ospg (Q3YTH2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3YTH2
- Type
- protein
- Length
- 196 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1809854595B6549DcFcCEcDF9706AC2d1a0E0E17
- Molecule
- Protein kinase ospg
- UniProt
- Q3YTH2
- Pockets
- 4 · best druggability 0.61
Structure
1 distinct chain · 36% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein kinase ospg | protein | 196 | 36% helix, 24% strand | Q3YTH2 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 389 | 0.61 | 0.76 | 41 | empty |
| 2 | 173 | 0.51 | 0.78 | 23 | empty |
| 3 | 76 | 0.40 | 0.79 | 16 | empty |
| 4 | 90 | 0.38 | 0.76 | 18 | empty |
Compared structures
- 4Q5H · Shigella Effector Kinase OspG bound to AMPPNP and E2-Ub UbcH7-Ub Conjugate · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 4Q5H · Shigella effector kinase ospg bound to amppnp and E2-ub UBCH7-ub conjugate · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 4Q5E · Shigella Effector Kinase OspG bound to E2-Ub UbcH7-Ub Conjugate · an experimental structure of the same protein · chain A against A, TM-score 0.85
- 4Q5E · Shigella effector kinase ospg bound to E2-ub UBCH7-ub conjugate · an experimental structure of the same protein · chain A against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3YTH2
- Elsewhere: UniProt Q3YTH2 · AlphaFold DB Q3YTH2
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