Research workbench
AlphaFold monomer V2.0 prediction for outer surface protein B (P17739)
Analyse AlphaFold monomer V2.0 prediction for outer surface protein B (P17739) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P17739
- Type
- protein
- Length
- 296 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1a43F95a36d4F45EFC67b40D463609Cf81b3b63f
- Molecule
- Outer surface protein B
- UniProt
- P17739
- Pockets
- 1 · best druggability 0.67
Structure
1 distinct chain · 4% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer surface protein B | protein | 296 | 4% helix, 48% strand | P17739 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 605 | 0.67 | 0.76 | 54 | empty |
Compared structures
- 1P4P · Outer Surface Protein B of B. burgdorferi: crystal structure of the C-terminal fragment · an experimental structure of the same protein · chain A against A, TM-score 0.46
- 1P4P · Outer surface protein B of B. burgdorferi: crystal structure of the C-terminal fragment · an experimental structure of the same protein · chain A against A, TM-score 0.46
- 1RJL · Structure of the complex between OspB-CT and bactericidal Fab-H6831 · an experimental structure of the same protein · chain A against C, TM-score 0.31
- 1RJL · Structure of the complex between ospb-ct and bactericidal Fab-H6831 · an experimental structure of the same protein · chain A against C, TM-score 0.31
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P17739
- Elsewhere: UniProt P17739 · AlphaFold DB P17739
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