Research workbench
AlphaFold monomer V2.0 prediction for medium-wave-sensitive opsin 1 (O18911)
Analyse AlphaFold monomer V2.0 prediction for medium-wave-sensitive opsin 1 (O18911) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O18911
- Type
- protein
- Length
- 273 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- Medium-wave-sensitive opsin 1
- UniProt
- O18911
- Pockets
- 3 · best druggability 0.80
Structure
1 distinct chain · 77% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Medium-wave-sensitive opsin 1 | protein | 273 | 77% helix, 2% strand | O18911 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 125 | 0.80 | 0.97 | 23 | empty |
| 2 | 322 | 0.68 | 0.82 | 41 | empty |
| 3 | 55 | 0.29 | 0.74 | 12 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O18911
- Elsewhere: UniProt O18911 · AlphaFold DB O18911
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