Research workbench
AlphaFold monomer V2.0 prediction for green-sensitive opsin-2 (Q8AYM8)
Analyse AlphaFold monomer V2.0 prediction for green-sensitive opsin-2 (Q8AYM8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8AYM8
- Type
- protein
- Length
- 349 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x903d68EF8d4158E11a1CE5C12dC20a18D2164C5b
- Molecule
- Green-sensitive opsin-2
- UniProt
- Q8AYM8
- Pockets
- 2 · best druggability 0.79
Structure
1 distinct chain · 68% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Green-sensitive opsin-2 | protein | 349 | 68% helix, 4% strand | Q8AYM8 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 159 | 0.79 | 0.95 | 32 | empty |
| 2 | 429 | 0.69 | 0.81 | 49 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8AYM8
- Elsewhere: UniProt Q8AYM8 · AlphaFold DB Q8AYM8
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