Research workbench
AlphaFold monomer V2.0 prediction for short-wave-sensitive opsin 1 (O13092)
Analyse AlphaFold monomer V2.0 prediction for short-wave-sensitive opsin 1 (O13092) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O13092
- Type
- protein
- Length
- 349 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- Short-wave-sensitive opsin 1
- UniProt
- O13092
- Pockets
- 6 · best druggability 0.80
Structure
1 distinct chain · 67% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Short-wave-sensitive opsin 1 | protein | 349 | 67% helix, 2% strand | O13092 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 116 | 0.80 | 0.98 | 28 | empty |
| 2 | 154 | 0.68 | 0.88 | 26 | empty |
| 3 | 68 | 0.49 | 0.84 | 17 | empty |
| 4 | 107 | 0.48 | 0.80 | 19 | empty |
| 5 | 116 | 0.43 | 0.77 | 17 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O13092
- Elsewhere: UniProt O13092 · AlphaFold DB O13092
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