Research workbench
AlphaFold monomer V2.0 prediction for short-wave-sensitive opsin 1 (P51491)
Analyse AlphaFold monomer V2.0 prediction for short-wave-sensitive opsin 1 (P51491) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P51491
- Type
- protein
- Length
- 346 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- Short-wave-sensitive opsin 1
- UniProt
- P51491
- Pockets
- 7 · best druggability 0.81
Structure
1 distinct chain · 68% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Short-wave-sensitive opsin 1 | protein | 346 | 68% helix, 2% strand | P51491 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 136 | 0.81 | 0.98 | 26 | empty |
| 2 | 115 | 0.50 | 0.81 | 23 | empty |
| 3 | 59 | 0.50 | 0.86 | 15 | empty |
| 4 | 141 | 0.48 | 0.78 | 21 | empty |
| 5 | 87 | 0.35 | 0.74 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P51491
- Elsewhere: UniProt P51491 · AlphaFold DB P51491
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