Research workbench
AlphaFold monomer V2.0 prediction for opsin RH6 (O01668)
Analyse AlphaFold monomer V2.0 prediction for opsin RH6 (O01668) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O01668
- Type
- protein
- Length
- 369 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Opsin RH6
- UniProt
- O01668
- Pockets
- 5 · best druggability 0.81
Structure
1 distinct chain · 74% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Opsin RH6 | protein | 369 | 74% helix, 2% strand | O01668 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 142 | 0.81 | 0.98 | 28 | empty |
| 2 | 90 | 0.43 | 0.78 | 16 | empty |
| 3 | 61 | 0.42 | 0.81 | 22 | empty |
| 4 | 76 | 0.41 | 0.79 | 15 | empty |
| 5 | 71 | 0.34 | 0.76 | 17 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O01668
- Elsewhere: UniProt O01668 · AlphaFold DB O01668
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