Research workbench
AlphaFold monomer V2.0 prediction for opsin RH1 (P06002)
Analyse AlphaFold monomer V2.0 prediction for opsin RH1 (P06002) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P06002
- Type
- protein
- Length
- 373 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9CEd9D970D1D6A73F17D1B47f0bAAF860B666B0D
- Molecule
- Opsin RH1
- UniProt
- P06002
- Pockets
- 3 · best druggability 0.80
Structure
1 distinct chain · 77% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Opsin RH1 | protein | 373 | 77% helix, 3% strand | P06002 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 114 | 0.80 | 0.98 | 26 | empty |
| 2 | 250 | 0.62 | 0.81 | 47 | empty |
| 3 | 51 | 0.31 | 0.76 | 13 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06002
- Elsewhere: UniProt P06002 · AlphaFold DB P06002
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