Research workbench
AlphaFold monomer V2.0 prediction for 12-oxophytodienoate reductase 3 (Q9FUP0)
Analyse AlphaFold monomer V2.0 prediction for 12-oxophytodienoate reductase 3 (Q9FUP0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9FUP0
- Type
- protein
- Length
- 391 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- 12-oxophytodienoate reductase 3
- UniProt
- Q9FUP0
- Pockets
- 4 · best druggability 0.75
Structure
1 distinct chain · 36% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 12-oxophytodienoate reductase 3 | protein | 391 | 36% helix, 15% strand | Q9FUP0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 528 | 0.75 | 0.83 | 45 | empty |
| 2 | 151 | 0.56 | 0.82 | 20 | empty |
| 3 | 59 | 0.30 | 0.75 | 16 | empty |
| 4 | 52 | 0.27 | 0.74 | 14 | empty |
Compared structures
- 1Q45 · 12-0XO-phytodienoate reductase isoform 3 · an experimental structure of the same protein · chain A against B, TM-score 0.93
- 1Q45 · 12-0xo-phytodienoate reductase isoform 3 · an experimental structure of the same protein · chain A against B, TM-score 0.93
- 2G5W · X-ray crystal structure of Arabidopsis thaliana 12-oxophytodienoate reductase isoform 3… · an experimental structure of the same protein · chain A against B, TM-score 0.93
- 2G5W · X-ray crystal structure of arabidopsis thaliana 12-oxophytodienoate reductase isoform 3… · an experimental structure of the same protein · chain A against B, TM-score 0.93
- 2Q3O · Ensemble refinement of the protein crystal structure of 12-oxo- phytodienoate reductase… · an experimental structure of the same protein · chain A against B, TM-score 0.93
- 2Q3O · Ensemble refinement of the protein crystal structure of 12-oxo-phytodienoate reductase… · an experimental structure of the same protein · chain A against B, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9FUP0
- Elsewhere: UniProt Q9FUP0 · AlphaFold DB Q9FUP0
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