Research workbench
AlphaFold monomer V2.0 prediction for oligopeptide transport system permease protein oppc (P0A4P0)
Analyse AlphaFold monomer V2.0 prediction for oligopeptide transport system permease… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0A4P0
- Type
- protein
- Length
- 294 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7782F4817b37743d738e9aF842bf74bd50f2015E
- Molecule
- Oligopeptide transport system permease protein oppc
- UniProt
- P0A4P0
- Pockets
- 5 · best druggability 0.44
Structure
1 distinct chain · 80% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Oligopeptide transport system permease protein oppc | protein | 294 | 80% helix, 1% strand | P0A4P0 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 158 | 0.44 | 0.75 | 23 | empty |
| 2 | 133 | 0.41 | 0.75 | 20 | empty |
| 3 | 125 | 0.40 | 0.74 | 17 | empty |
| 4 | 74 | 0.34 | 0.76 | 20 | empty |
| 5 | 52 | 0.27 | 0.73 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A4P0
- Elsewhere: UniProt P0A4P0 · AlphaFold DB P0A4P0
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