Research workbench
AlphaFold monomer V2.0 prediction for oligopeptide-binding protein oppa (Q9CEK0)
Analyse AlphaFold monomer V2.0 prediction for oligopeptide-binding protein oppa (Q9CEK0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9CEK0
- Type
- protein
- Length
- 600 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7f252798C74E00E84c69B04729dd9CAa146545FC
- Molecule
- Oligopeptide-binding protein oppa
- UniProt
- Q9CEK0
- Pockets
- 6 · best druggability 0.89
Structure
1 distinct chain · 28% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Oligopeptide-binding protein oppa | protein | 600 | 28% helix, 22% strand | Q9CEK0 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1141 | 0.89 | 0.90 | 118 | empty |
| 2 | 116 | 0.41 | 0.76 | 20 | empty |
| 3 | 127 | 0.40 | 0.75 | 27 | empty |
| 4 | 88 | 0.39 | 0.77 | 24 | empty |
| 5 | 53 | 0.38 | 0.81 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CEK0
- Elsewhere: UniProt Q9CEK0 · AlphaFold DB Q9CEK0
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