Research workbench
AlphaFold monomer V2.0 prediction for melanopsin (Q5XXP2)
Analyse AlphaFold monomer V2.0 prediction for melanopsin (Q5XXP2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5XXP2
- Type
- protein
- Length
- 469 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaB789Baa1a4cC08f183fc9B31E29805Ea05FE2FC
- Molecule
- Melanopsin
- UniProt
- Q5XXP2
- Pockets
- 5 · best druggability 0.81
Structure
1 distinct chain · 53% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Melanopsin | protein | 469 | 53% helix, 2% strand | Q5XXP2 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 138 | 0.81 | 0.97 | 29 | empty |
| 2 | 637 | 0.67 | 0.76 | 70 | empty |
| 3 | 91 | 0.37 | 0.75 | 17 | empty |
| 4 | 74 | 0.33 | 0.75 | 9 | empty |
| 5 | 78 | 0.32 | 0.74 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5XXP2
- Elsewhere: UniProt Q5XXP2 · AlphaFold DB Q5XXP2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.