Research workbench
AlphaFold monomer V2.0 prediction for melanopsin-B (O57422)
Analyse AlphaFold monomer V2.0 prediction for melanopsin-B (O57422) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O57422
- Type
- protein
- Length
- 534 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA722eA6E71d03bAe87Bd6148797813D88FAe94D0
- Molecule
- Melanopsin-B
- UniProt
- O57422
- Pockets
- 6 · best druggability 0.80
Structure
1 distinct chain · 55% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Melanopsin-B | protein | 534 | 55% helix, 1% strand | O57422 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 122 | 0.80 | 0.98 | 27 | empty |
| 2 | 351 | 0.65 | 0.80 | 51 | empty |
| 3 | 594 | 0.64 | 0.74 | 45 | empty |
| 4 | 251 | 0.54 | 0.76 | 27 | empty |
| 5 | 176 | 0.49 | 0.76 | 21 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O57422
- Elsewhere: UniProt O57422 · AlphaFold DB O57422
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.