Research workbench
AlphaFold monomer V2.0 prediction for glucans biosynthesis protein D (B1XDD6)
Analyse AlphaFold monomer V2.0 prediction for glucans biosynthesis protein D (B1XDD6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1XDD6
- Type
- protein
- Length
- 551 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x16DAa6a077550712A5E3955F590a002aC60F6B0D
- Molecule
- Glucans biosynthesis protein D
- UniProt
- B1XDD6
- Pockets
- 8 · best druggability 0.73
Structure
1 distinct chain · 11% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glucans biosynthesis protein D | protein | 551 | 11% helix, 40% strand | B1XDD6 |
Pockets
8 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 465 | 0.73 | 0.83 | 56 | empty |
| 2 | 146 | 0.56 | 0.82 | 32 | empty |
| 3 | 233 | 0.53 | 0.77 | 26 | empty |
| 4 | 85 | 0.52 | 0.84 | 23 | empty |
| 5 | 168 | 0.50 | 0.78 | 29 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1XDD6
- Elsewhere: UniProt B1XDD6 · AlphaFold DB B1XDD6
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