Research workbench
AlphaFold monomer V2.0 prediction for putative oxpp cycle protein opca (P73720)
Analyse AlphaFold monomer V2.0 prediction for putative oxpp cycle protein opca (P73720) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P73720
- Type
- protein
- Length
- 475 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x980A8F29288e5e2E590e10bcd7a58B08E402ab91
- Molecule
- Putative oxpp cycle protein opca
- UniProt
- P73720
- Pockets
- 7 · best druggability 0.68
Structure
1 distinct chain · 37% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative oxpp cycle protein opca | protein | 475 | 37% helix, 23% strand | P73720 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 571 | 0.68 | 0.78 | 55 | empty |
| 2 | 92 | 0.65 | 0.90 | 24 | empty |
| 3 | 185 | 0.55 | 0.80 | 30 | empty |
| 4 | 139 | 0.53 | 0.81 | 28 | empty |
| 5 | 124 | 0.45 | 0.77 | 22 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 9EMM · Glucose-6-phosphate dehydrogenase (G6PDH) in complex with protein OpcA from Synechocystis… · an experimental structure of the same protein · chain A against E, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P73720
- Elsewhere: UniProt P73720 · AlphaFold DB P73720
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