Research workbench
AlphaFold monomer V2.0 prediction for opacity protein OPA54 (Q04877)
Analyse AlphaFold monomer V2.0 prediction for opacity protein OPA54 (Q04877) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q04877
- Type
- protein
- Length
- 282 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- Opacity protein OPA54
- UniProt
- Q04877
- Pockets
- 2 · best druggability 0.70
Structure
1 distinct chain · 9% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Opacity protein OPA54 | protein | 282 | 9% helix, 34% strand | Q04877 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 638 | 0.70 | 0.78 | 50 | empty |
| 2 | 135 | 0.46 | 0.77 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04877
- Elsewhere: UniProt Q04877 · AlphaFold DB Q04877
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