Research workbench
AlphaFold monomer V2.0 prediction for outer membrane porin F (Q56828)
Analyse AlphaFold monomer V2.0 prediction for outer membrane porin F (Q56828) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q56828
- Type
- protein
- Length
- 369 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7873A5D824374e6d396229A08164bC7953c733b0
- Molecule
- Outer membrane porin F
- UniProt
- Q56828
- Pockets
- 3 · best druggability 0.84
Structure
1 distinct chain · 6% helix, 56% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane porin F | protein | 369 | 6% helix, 56% strand | Q56828 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 812 | 0.84 | 0.86 | 83 | empty |
| 2 | 100 | 0.53 | 0.83 | 23 | empty |
| 3 | 74 | 0.45 | 0.82 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q56828
- Elsewhere: UniProt Q56828 · AlphaFold DB Q56828
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