Research workbench
AlphaFold monomer V2.0 prediction for outer membrane porin protein ompd (D0ZXQ1)
Analyse AlphaFold monomer V2.0 prediction for outer membrane porin protein ompd (D0ZXQ1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- D0ZXQ1
- Type
- protein
- Length
- 362 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfD660B8b17eFc3817DC3dEbc53D47001872A2Ced
- Molecule
- Outer membrane porin protein ompd
- UniProt
- D0ZXQ1
- Pockets
- 2 · best druggability 0.81
Structure
1 distinct chain · 7% helix, 54% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane porin protein ompd | protein | 362 | 7% helix, 54% strand | D0ZXQ1 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1008 | 0.81 | 0.83 | 104 | empty |
| 2 | 150 | 0.51 | 0.79 | 38 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D0ZXQ1
- Elsewhere: UniProt D0ZXQ1 · AlphaFold DB D0ZXQ1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.