Research workbench

AlphaFold monomer V2.0 prediction for outer membrane porin C (Q8CVW1)

Analyse AlphaFold monomer V2.0 prediction for outer membrane porin C (Q8CVW1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q8CVW1
Type: protein
Length: 375 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xcbd6C743Abc67aE89D40a6eAd06465a8c4D0789f
Molecule: Outer membrane porin C
UniProt: Q8CVW1
Pockets: 3 · best druggability 0.78

Structure

1 distinct chain · 7% helix, 56% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Outer membrane porin C	protein	375	7% helix, 56% strand	Q8CVW1

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	986	0.78	0.80	89	empty
2	341	0.73	0.85	44	empty
3	90	0.45	0.80	22	empty

Compared structures

2XE1 · Molecular insights into clinically isolated OmpC mutants and their role in multi-drug… · an experimental structure of the same protein · chain A against A, TM-score 0.94
2XE1 · Molecular insights into clinically isolated ompc mutants and their role in multi-drug… · an experimental structure of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8CVW1
Elsewhere: UniProt Q8CVW1 · AlphaFold DB Q8CVW1

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.