Research workbench
AlphaFold monomer V2.0 prediction for outer membrane protein B (O06653)
Analyse AlphaFold monomer V2.0 prediction for outer membrane protein B (O06653) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O06653
- Type
- protein
- Length
- 1,656 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78490a109Cb9CB41e44307c4DA6e92eD2f2cEa94
- Molecule
- Outer membrane protein B
- UniProt
- O06653
- Pockets
- 6 · best druggability 0.83
Structure
1 distinct chain · 6% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane protein B | protein | 1656 | 6% helix, 47% strand | O06653 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 263 | 0.83 | 0.94 | 43 | empty |
| 2 | 456 | 0.76 | 0.85 | 59 | empty |
| 3 | 114 | 0.65 | 0.88 | 33 | empty |
| 4 | 251 | 0.55 | 0.77 | 41 | empty |
| 5 | 61 | 0.40 | 0.81 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O06653
- Elsewhere: UniProt O06653 · AlphaFold DB O06653
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