Research workbench
AlphaFold monomer V2.0 prediction for outer membrane protein a (P57414)
Analyse AlphaFold monomer V2.0 prediction for outer membrane protein a (P57414) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P57414
- Type
- protein
- Length
- 349 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa3909E2d84022382590ecE114bB40fE85028D066
- Molecule
- Outer membrane protein a
- UniProt
- P57414
- Pockets
- 2 · best druggability 0.73
Structure
1 distinct chain · 20% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane protein a | protein | 349 | 20% helix, 39% strand | P57414 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 449 | 0.73 | 0.82 | 47 | empty |
| 2 | 80 | 0.36 | 0.76 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P57414
- Elsewhere: UniProt P57414 · AlphaFold DB P57414
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