Research workbench
AlphaFold monomer V2.0 prediction for nxpe family member 1 (Q05004)
Analyse AlphaFold monomer V2.0 prediction for nxpe family member 1 (Q05004) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q05004
- Type
- protein
- Length
- 540 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD12D36D36eCf8dB98378c4D84eC368725Cb3623E
- Molecule
- Nxpe family member 1
- UniProt
- Q05004
- Pockets
- 6 · best druggability 0.71
Structure
1 distinct chain · 30% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nxpe family member 1 | protein | 540 | 30% helix, 28% strand | Q05004 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 425 | 0.71 | 0.81 | 53 | empty |
| 2 | 307 | 0.52 | 0.74 | 38 | empty |
| 3 | 118 | 0.49 | 0.80 | 23 | empty |
| 4 | 98 | 0.41 | 0.77 | 17 | empty |
| 5 | 71 | 0.38 | 0.78 | 14 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q05004
- Elsewhere: UniProt Q05004 · AlphaFold DB Q05004
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