Research workbench
AlphaFold monomer V2.0 prediction for nuclear RNA export factor 2 (Q9VV73)
Analyse AlphaFold monomer V2.0 prediction for nuclear RNA export factor 2 (Q9VV73) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9VV73
- Type
- protein
- Length
- 841 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0056155E6B76709C124E31067C4d1B97cA9dA71a
- Molecule
- Nuclear RNA export factor 2
- UniProt
- Q9VV73
- Pockets
- 9 · best druggability 0.61
Structure
1 distinct chain · 34% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nuclear RNA export factor 2 | protein | 841 | 34% helix, 23% strand | Q9VV73 |
Pockets
9 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 423 | 0.61 | 0.76 | 31 | empty |
| 2 | 237 | 0.49 | 0.74 | 23 | empty |
| 3 | 85 | 0.45 | 0.80 | 22 | empty |
| 4 | 123 | 0.45 | 0.77 | 27 | empty |
| 5 | 142 | 0.42 | 0.75 | 24 | empty |
Compared structures
- 6MRK · Crystal structure of dmNxf2 NTF2-like domain in complex with Nxt1/p15 · an experimental structure of the same protein · chain A against B, TM-score 0.22
- 6MRK · Crystal structure of DMNXF2 NTF2-like domain in complex with NXT1/P15 · an experimental structure of the same protein · chain A against B, TM-score 0.22
- 6OPF · Crystal structure of dmNxf2 UBA domain fused with Panoramix helix · an experimental structure of the same protein · chain A against F, TM-score 0.07
- 6OPF · Crystal structure of DMNXF2 uba domain fused with panoramix helix · an experimental structure of the same protein · chain A against F, TM-score 0.07
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VV73
- Elsewhere: UniProt Q9VV73 · AlphaFold DB Q9VV73
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