Research workbench
AlphaFold monomer V2.0 prediction for transcription TERMINATION/ANTITERMINATION protein nusg (P29397)
Analyse AlphaFold monomer V2.0 prediction for transcription TERMINATION/ANTITERMINATION… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P29397
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- Transcription TERMINATION/ANTITERMINATION protein nusg
- UniProt
- P29397
- Pockets
- 2 · best druggability 0.68
Structure
1 distinct chain · 13% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription TERMINATION/ANTITERMINATION protein nusg | protein | 353 | 13% helix, 44% strand | P29397 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 646 | 0.68 | 0.77 | 53 | empty |
| 2 | 403 | 0.61 | 0.76 | 52 | empty |
Compared structures
- 2XHC · Crystal structure of thermotoga maritima N-utilization substance G (nusg) · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 2XHC · Crystal Structure of Thermotoga maritima N-utilization Substance G (NusG) · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 2XHA · Crystal Structure of Domain 2 of Thermotoga maritima N-utilization Substance G (NusG) · an experimental structure of the same protein · chain A against A, TM-score 0.52
- 2XHA · Crystal structure of domain 2 of thermotoga maritima N-utilization substance G (nusg) · an experimental structure of the same protein · chain A against A, TM-score 0.52
- 2LQ8 · Domain interaction in Thermotoga maritima NusG · an experimental structure of the same protein · chain A against A, TM-score 0.47
- 2LQ8 · Domain interaction in thermotoga maritima nusg · an experimental structure of the same protein · chain A against A, TM-score 0.47
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29397
- Elsewhere: UniProt P29397 · AlphaFold DB P29397
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