AlphaFold monomer V2.0 prediction for nucleoporin NUP85 (P46673)

Structure

1 distinct chain · 62% helix, 2% strand (DSSP).

Pockets

8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Compared structures

• 4XMM · Structure of the yeast coat nucleoporin complex, space group C2 · an experimental structure of the same protein · chain A against D, TM-score 0.76
• 4XMM · Structure of the yeast coat nucleoporin complex, space group C2 · an experimental structure of the same protein · chain A against D, TM-score 0.76
• 7N84 · Double nuclear outer ring from the isolated yeast npc · an experimental structure of the same protein · chain A against m, TM-score 0.73
• 7N84 · Double nuclear outer ring from the isolated yeast NPC · an experimental structure of the same protein · chain A against m, TM-score 0.73
• 7N9F · Structure of the in situ yeast NPC · an experimental structure of the same protein · chain A against i, TM-score 0.71
• 8TIE · Double nuclear outer ring of Nup84-complexes from the yeast NPC · an experimental structure of the same protein · chain A against m, TM-score 0.70
• 3F3F · Crystal structure of the nucleoporin pair NUP85-SEH1, space group P21 · an experimental structure of the same protein · chain A against D, TM-score 0.66
• 3F3F · Crystal structure of the nucleoporin pair Nup85-Seh1, space group P21 · an experimental structure of the same protein · chain A against D, TM-score 0.66
• 3F3P · Crystal structure of the nucleoporin pair Nup85-Seh1, space group P21212 · an experimental structure of the same protein · chain A against K, TM-score 0.65
• 3F3P · Crystal structure of the nucleoporin pair NUP85-SEH1, space group P21212 · an experimental structure of the same protein · chain A against K, TM-score 0.65

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P46673
• Elsewhere: UniProt P46673 · AlphaFold DB P46673