Research workbench
AlphaFold monomer V2.0 prediction for nuclear pore complex protein NUP85 (Q4QQS8)
Analyse AlphaFold monomer V2.0 prediction for nuclear pore complex protein NUP85… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4QQS8
- Type
- protein
- Length
- 656 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c7eF5512E51Bcd3d8e1379AFF339AD78CFbD034
- Molecule
- Nuclear pore complex protein NUP85
- UniProt
- Q4QQS8
- Pockets
- 7 · best druggability 0.47
Structure
1 distinct chain · 67% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nuclear pore complex protein NUP85 | protein | 656 | 67% helix, 3% strand | Q4QQS8 |
Pockets
7 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 64 | 0.47 | 0.84 | 20 | empty |
| 2 | 159 | 0.47 | 0.76 | 23 | empty |
| 3 | 98 | 0.40 | 0.76 | 17 | empty |
| 4 | 63 | 0.39 | 0.80 | 14 | empty |
| 5 | 125 | 0.39 | 0.74 | 25 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4QQS8
- Elsewhere: UniProt Q4QQS8 · AlphaFold DB Q4QQS8
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