Research workbench
AlphaFold monomer V2.0 prediction for nucleoporin NUP85 (G0SDQ4)
Analyse AlphaFold monomer V2.0 prediction for nucleoporin NUP85 (G0SDQ4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- G0SDQ4
- Type
- protein
- Length
- 1,169 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Nucleoporin NUP85
- UniProt
- G0SDQ4
- Pockets
- 7 · best druggability 0.71
Structure
1 distinct chain · 49% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoporin NUP85 | protein | 1169 | 49% helix, 0% strand | G0SDQ4 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 836 | 0.71 | 0.77 | 86 | empty |
| 2 | 481 | 0.70 | 0.81 | 57 | empty |
| 3 | 523 | 0.70 | 0.80 | 48 | empty |
| 4 | 476 | 0.64 | 0.77 | 46 | empty |
| 5 | 56 | 0.47 | 0.85 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0SDQ4
- Elsewhere: UniProt G0SDQ4 · AlphaFold DB G0SDQ4
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