Research workbench
AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D (A0QJV0)
Analyse AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0QJV0
- Type
- protein
- Length
- 441 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9DF183349B8fe79e50431aA1CD89D989926F9f0f
- Molecule
- NADH-quinone oxidoreductase subunit D
- UniProt
- A0QJV0
- Pockets
- 4 · best druggability 0.70
Structure
1 distinct chain · 49% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-quinone oxidoreductase subunit D | protein | 441 | 49% helix, 14% strand | A0QJV0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.70 | 0.98 | 18 | empty |
| 2 | 78 | 0.56 | 0.87 | 20 | empty |
| 3 | 161 | 0.44 | 0.75 | 25 | empty |
| 4 | 76 | 0.37 | 0.77 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0QJV0
- Elsewhere: UniProt A0QJV0 · AlphaFold DB A0QJV0
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