Research workbench
AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D (Q83BQ8)
Analyse AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit D… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q83BQ8
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x358d8c60531b3A6C3dA63DB670f28D4Ec447FC30
- Molecule
- NADH-quinone oxidoreductase subunit D
- UniProt
- Q83BQ8
- Pockets
- 4 · best druggability 0.49
Structure
1 distinct chain · 51% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-quinone oxidoreductase subunit D | protein | 417 | 51% helix, 12% strand | Q83BQ8 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 63 | 0.49 | 0.85 | 19 | empty |
| 2 | 87 | 0.48 | 0.82 | 21 | empty |
| 3 | 95 | 0.36 | 0.75 | 16 | empty |
| 4 | 76 | 0.34 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q83BQ8
- Elsewhere: UniProt Q83BQ8 · AlphaFold DB Q83BQ8
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