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AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit C/D (B2V8J2)
Analyse AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit C/D… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B2V8J2
- Type
- protein
- Length
- 576 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9e7B5D87BCfF3f2778427eC04CAcD586303e4B9c
- Molecule
- NADH-quinone oxidoreductase subunit C/D
- UniProt
- B2V8J2
- Pockets
- 6 · best druggability 0.56
Structure
1 distinct chain · 42% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-quinone oxidoreductase subunit C/D | protein | 576 | 42% helix, 17% strand | B2V8J2 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 254 | 0.56 | 0.77 | 29 | empty |
| 2 | 122 | 0.51 | 0.80 | 26 | empty |
| 3 | 135 | 0.46 | 0.77 | 19 | empty |
| 4 | 105 | 0.40 | 0.77 | 18 | empty |
| 5 | 95 | 0.38 | 0.76 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2V8J2
- Elsewhere: UniProt B2V8J2 · AlphaFold DB B2V8J2
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