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AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit C/D (P0A1Y7)
Analyse AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit C/D… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0A1Y7
- Type
- protein
- Length
- 596 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0802a4d42FE33Ea91364Adff0d1651923952Ab99
- Molecule
- NADH-quinone oxidoreductase subunit C/D
- UniProt
- P0A1Y7
- Pockets
- 6 · best druggability 0.65
Structure
1 distinct chain · 42% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-quinone oxidoreductase subunit C/D | protein | 596 | 42% helix, 17% strand | P0A1Y7 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 354 | 0.65 | 0.80 | 46 | empty |
| 2 | 459 | 0.64 | 0.78 | 36 | empty |
| 3 | 154 | 0.50 | 0.78 | 20 | empty |
| 4 | 54 | 0.47 | 0.85 | 17 | empty |
| 5 | 64 | 0.33 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A1Y7
- Elsewhere: UniProt P0A1Y7 · AlphaFold DB P0A1Y7
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