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AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit C/D (A3PKI2)
Analyse AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit C/D… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A3PKI2
- Type
- protein
- Length
- 580 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- NADH-quinone oxidoreductase subunit C/D
- UniProt
- A3PKI2
- Pockets
- 6 · best druggability 0.57
Structure
1 distinct chain · 44% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-quinone oxidoreductase subunit C/D | protein | 580 | 44% helix, 16% strand | A3PKI2 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 218 | 0.57 | 0.79 | 24 | empty |
| 2 | 167 | 0.51 | 0.78 | 26 | empty |
| 3 | 121 | 0.45 | 0.78 | 25 | empty |
| 4 | 58 | 0.41 | 0.81 | 14 | empty |
| 5 | 104 | 0.38 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3PKI2
- Elsewhere: UniProt A3PKI2 · AlphaFold DB A3PKI2
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