Research workbench
AlphaFold monomer V2.0 prediction for GDP-mannose pyrophosphatase (P37128)
Analyse AlphaFold monomer V2.0 prediction for GDP-mannose pyrophosphatase (P37128) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P37128
- Type
- protein
- Length
- 191 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x52dd39a1F0b0b49aB790E19FD5d5b8d2eb36C77b
- Molecule
- GDP-mannose pyrophosphatase
- UniProt
- P37128
- Pockets
- 1 · best druggability 0.54
Structure
1 distinct chain · 22% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | GDP-mannose pyrophosphatase | protein | 191 | 22% helix, 42% strand | P37128 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 311 | 0.54 | 0.75 | 40 | empty |
Compared structures
- 3O69 · Structure of the E100A E.COLI GDP-mannose hydrolase (yffh) in complex with mg++ · an experimental structure of the same protein · chain A against B, TM-score 0.99
- 3O69 · Structure of the E100A E.coli GDP-mannose hydrolase (yffh) in complex with Mg++ · an experimental structure of the same protein · chain A against B, TM-score 0.99
- 3O6Z · Structure of the D152A E.COLI GDP-mannose hydrolase (yffh) in complex with mg++ · an experimental structure of the same protein · chain A against B, TM-score 0.98
- 3O6Z · Structure of the D152A E.coli GDP-mannose hydrolase (yffh) in complex with Mg++ · an experimental structure of the same protein · chain A against B, TM-score 0.98
- 3O61 · Structure of the E100A E.COLI GDP-mannose hydrolase (yffh) in complex with GDP-mannose… · an experimental structure of the same protein · chain A against D, TM-score 0.98
- 3O61 · Structure of the E100A E.coli GDP-mannose hydrolase (yffh) in complex with GDP-mannose… · an experimental structure of the same protein · chain A against D, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P37128
- Elsewhere: UniProt P37128 · AlphaFold DB P37128
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