Research workbench
AlphaFold monomer V2.0 prediction for NAD-capped RNA hydrolase nudc (Q8DD17)
Analyse AlphaFold monomer V2.0 prediction for NAD-capped RNA hydrolase nudc (Q8DD17) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8DD17
- Type
- protein
- Length
- 261 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x55f3944429C2C64Ac722744a98877eb19D370D5D
- Molecule
- NAD-capped RNA hydrolase nudc
- UniProt
- Q8DD17
- Pockets
- 4 · best druggability 0.61
Structure
1 distinct chain · 23% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NAD-capped RNA hydrolase nudc | protein | 261 | 23% helix, 36% strand | Q8DD17 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 307 | 0.61 | 0.79 | 27 | empty |
| 2 | 63 | 0.37 | 0.78 | 12 | empty |
| 3 | 63 | 0.32 | 0.75 | 14 | empty |
| 4 | 52 | 0.27 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DD17
- Elsewhere: UniProt Q8DD17 · AlphaFold DB Q8DD17
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