Research workbench
AlphaFold monomer V2.0 prediction for NAD-capped RNA hydrolase nudc (O86062)
Analyse AlphaFold monomer V2.0 prediction for NAD-capped RNA hydrolase nudc (O86062) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O86062
- Type
- protein
- Length
- 278 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- NAD-capped RNA hydrolase nudc
- UniProt
- O86062
- Pockets
- 3 · best druggability 0.63
Structure
1 distinct chain · 21% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NAD-capped RNA hydrolase nudc | protein | 278 | 21% helix, 36% strand | O86062 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 366 | 0.63 | 0.78 | 35 | empty |
| 2 | 136 | 0.44 | 0.76 | 26 | empty |
| 3 | 81 | 0.41 | 0.79 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O86062
- Elsewhere: UniProt O86062 · AlphaFold DB O86062
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