Research workbench
AlphaFold monomer V2.0 prediction for nucleoside diphosphate-linked moiety X motif 17 (P0C025)
Analyse AlphaFold monomer V2.0 prediction for nucleoside diphosphate-linked moiety X… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0C025
- Type
- protein
- Length
- 328 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x714B37d4C8086b323D16Bb517466D864d4A312bA
- Molecule
- Nucleoside diphosphate-linked moiety X motif 17
- UniProt
- P0C025
- Pockets
- 3 · best druggability 0.78
Structure
1 distinct chain · 17% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoside diphosphate-linked moiety X motif 17 | protein | 328 | 17% helix, 28% strand | P0C025 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 330 | 0.78 | 0.88 | 36 | empty |
| 2 | 92 | 0.33 | 0.73 | 15 | empty |
| 3 | 62 | 0.29 | 0.74 | 14 | empty |
Compared structures
- 5LF8 · Human Nucleoside diphosphate-linked moiety X motif 17 (NUDT17) · an experimental structure of the same protein · chain A against A, TM-score 0.76
- 5LF8 · Human nucleoside diphosphate-linked moiety X motif 17 (NUDT17) · an experimental structure of the same protein · chain A against A, TM-score 0.76
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C025
- Elsewhere: UniProt P0C025 · AlphaFold DB P0C025
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