Research workbench
AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit C/D 1 (O66826)
Analyse AlphaFold monomer V2.0 prediction for NADH-quinone oxidoreductase subunit C/D 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O66826
- Type
- protein
- Length
- 593 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5f57163A7F1fa01D45359BDa541E09d1501B708F
- Molecule
- NADH-quinone oxidoreductase subunit C/D 1
- UniProt
- O66826
- Pockets
- 5 · best druggability 0.70
Structure
1 distinct chain · 42% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-quinone oxidoreductase subunit C/D 1 | protein | 593 | 42% helix, 17% strand | O66826 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 651 | 0.70 | 0.78 | 54 | empty |
| 2 | 66 | 0.56 | 0.88 | 19 | empty |
| 3 | 81 | 0.43 | 0.80 | 15 | empty |
| 4 | 115 | 0.40 | 0.75 | 19 | empty |
| 5 | 50 | 0.25 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O66826
- Elsewhere: UniProt O66826 · AlphaFold DB O66826
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