Research workbench
AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 1 (P48901)
Analyse AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P48901
- Type
- protein
- Length
- 351 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- NADH-ubiquinone oxidoreductase chain 1
- UniProt
- P48901
- Pockets
- 5 · best druggability 0.78
Structure
1 distinct chain · 72% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-ubiquinone oxidoreductase chain 1 | protein | 351 | 72% helix, 1% strand | P48901 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 121 | 0.78 | 0.97 | 33 | empty |
| 2 | 253 | 0.55 | 0.77 | 31 | empty |
| 3 | 269 | 0.54 | 0.75 | 28 | empty |
| 4 | 89 | 0.34 | 0.74 | 16 | empty |
| 5 | 60 | 0.28 | 0.73 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P48901
- Elsewhere: UniProt P48901 · AlphaFold DB P48901
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