Research workbench
AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 1 (P38598)
Analyse AlphaFold monomer V2.0 prediction for NADH-ubiquinone oxidoreductase chain 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P38598
- Type
- protein
- Length
- 318 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd6DfE5bdDd44c5887584131C31217ED4556a11e4
- Molecule
- NADH-ubiquinone oxidoreductase chain 1
- UniProt
- P38598
- Pockets
- 5 · best druggability 0.79
Structure
1 distinct chain · 69% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH-ubiquinone oxidoreductase chain 1 | protein | 318 | 69% helix, 1% strand | P38598 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 122 | 0.79 | 0.97 | 28 | empty |
| 2 | 196 | 0.54 | 0.78 | 26 | empty |
| 3 | 184 | 0.48 | 0.75 | 26 | empty |
| 4 | 81 | 0.34 | 0.73 | 20 | empty |
| 5 | 50 | 0.27 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P38598
- Elsewhere: UniProt P38598 · AlphaFold DB P38598
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